Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nr1h4Q60641 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.47□□□□□ -0.57
Nr1h4Q60641 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Gm27682-201ENSMUST00000183930 110 ntBASIC11.47□□□□□ -0.57
Nr1h4Q60641 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Gm42693-201ENSMUST00000196779 631 ntBASIC11.47□□□□□ -0.57
Nr1h4Q60641 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.47□□□□□ -0.57
Nr1h4Q60641 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nr1h4Q60641 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.46□□□□□ -0.57
Nr1h4Q60641 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gm1335-201ENSMUST00000121653 386 ntBASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gm27023-201ENSMUST00000182372 285 ntBASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gm27839-201ENSMUST00000184242 106 ntBASIC11.46□□□□□ -0.57
Nr1h4Q60641 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nr1h4Q60641 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nr1h4Q60641 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nr1h4Q60641 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Nr1h4Q60641 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nr1h4Q60641 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.46□□□□□ -0.58
Nr1h4Q60641 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nr1h4Q60641 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nr1h4Q60641 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.46□□□□□ -0.58
Nr1h4Q60641 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nr1h4Q60641 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nr1h4Q60641 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.45□□□□□ -0.58
Nr1h4Q60641 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.45□□□□□ -0.58
Nr1h4Q60641 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.45□□□□□ -0.58
Nr1h4Q60641 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms