Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CDC42BPAQ5VT25 ERP29P1-201ENST00000442902 706 ntBASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 AL354861.1-201ENST00000445213 355 ntBASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 SF1-209ENST00000433274 2317 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 DPY19L2P5-201ENST00000456300 331 ntBASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC42BPAQ5VT25 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 LINC00528-201ENST00000600723 2160 ntBASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 RNA5SP417-201ENST00000516459 108 ntBASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 BRD7P5-201ENST00000299197 1822 ntBASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 AC007950.2-201ENST00000615045 2347 ntBASIC22.16■■□□□ 1.14
CDC42BPAQ5VT25 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 RGS5-216ENST00000449680 788 ntTSL 3 BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 NAA40-205ENST00000539656 577 ntTSL 4 BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPAQ5VT25 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 STK16-203ENST00000409516 895 ntTSL 2 BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 AL592076.1-201ENST00000424448 303 ntBASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 AC092638.2-201ENST00000441105 947 ntBASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPAQ5VT25 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 API5-208ENST00000531273 1868 ntTSL 2 BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 NAMA-206ENST00000605377 509 ntTSL 5 BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPAQ5VT25 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPAQ5VT25 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms