Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col10a1Q05306 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.1□□□□□ -0.63
Col10a1Q05306 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Gm15808-201ENSMUST00000119046 604 ntBASIC11.1□□□□□ -0.63
Col10a1Q05306 Gm12164-201ENSMUST00000121695 551 ntBASIC11.1□□□□□ -0.63
Col10a1Q05306 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Gm4857-201ENSMUST00000192718 785 ntBASIC11.1□□□□□ -0.63
Col10a1Q05306 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.1□□□□□ -0.63
Col10a1Q05306 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col10a1Q05306 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Col10a1Q05306 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.1□□□□□ -0.63
Col10a1Q05306 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.1□□□□□ -0.63
Col10a1Q05306 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Col10a1Q05306 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col10a1Q05306 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Col10a1Q05306 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.09□□□□□ -0.63
Col10a1Q05306 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.09□□□□□ -0.63
Col10a1Q05306 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.09□□□□□ -0.63
Col10a1Q05306 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.09□□□□□ -0.63
Col10a1Q05306 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.09□□□□□ -0.63
Col10a1Q05306 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col10a1Q05306 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.08□□□□□ -0.63
Col10a1Q05306 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Col10a1Q05306 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col10a1Q05306 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col10a1Q05306 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col10a1Q05306 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.08□□□□□ -0.64
Col10a1Q05306 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col10a1Q05306 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.08□□□□□ -0.64
Col10a1Q05306 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Col10a1Q05306 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.08□□□□□ -0.64
Col10a1Q05306 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.08□□□□□ -0.64
Col10a1Q05306 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.08□□□□□ -0.64
Col10a1Q05306 Gm17812-201ENSMUST00000204935 318 ntBASIC11.08□□□□□ -0.64
Col10a1Q05306 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.08□□□□□ -0.64
Col10a1Q05306 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.08□□□□□ -0.64
Col10a1Q05306 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.08□□□□□ -0.64
Col10a1Q05306 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col10a1Q05306 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col10a1Q05306 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms