Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim43cP86449 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim43cP86449 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim43cP86449 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.06□□□□□ -0.32
Trim43cP86449 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim43cP86449 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.06□□□□□ -0.32
Trim43cP86449 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Trim43cP86449 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.06□□□□□ -0.32
Trim43cP86449 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Trim43cP86449 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim43cP86449 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trim43cP86449 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim43cP86449 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim43cP86449 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.05□□□□□ -0.32
Trim43cP86449 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43cP86449 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43cP86449 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim43cP86449 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43cP86449 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim43cP86449 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim43cP86449 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim43cP86449 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim43cP86449 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trim43cP86449 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.05□□□□□ -0.32
Trim43cP86449 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim43cP86449 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Trim43cP86449 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim43cP86449 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.05□□□□□ -0.32
Trim43cP86449 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim43cP86449 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim43cP86449 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim43cP86449 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim43cP86449 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.04□□□□□ -0.32
Trim43cP86449 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim43cP86449 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim43cP86449 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim43cP86449 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim43cP86449 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim43cP86449 Gm38314-201ENSMUST00000195709 625 ntBASIC13.04□□□□□ -0.32
Trim43cP86449 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.04□□□□□ -0.32
Trim43cP86449 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.04□□□□□ -0.32
Trim43cP86449 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Trim43cP86449 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms