Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm27675-201ENSMUST00000184527 94 ntBASIC12.62□□□□□ -0.39
NcanP55066 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
NcanP55066 Gm17936-201ENSMUST00000199413 988 ntBASIC12.62□□□□□ -0.39
NcanP55066 Wbp1-209ENSMUST00000205023 716 ntBASIC12.62□□□□□ -0.39
NcanP55066 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
NcanP55066 Gm3635-201ENSMUST00000212314 354 ntBASIC12.62□□□□□ -0.39
NcanP55066 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.62□□□□□ -0.39
NcanP55066 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.62□□□□□ -0.39
NcanP55066 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
NcanP55066 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NcanP55066 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
NcanP55066 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
NcanP55066 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
NcanP55066 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NcanP55066 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.61□□□□□ -0.39
NcanP55066 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
NcanP55066 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.61□□□□□ -0.39
NcanP55066 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.61□□□□□ -0.39
NcanP55066 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.61□□□□□ -0.39
NcanP55066 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.61□□□□□ -0.39
NcanP55066 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NcanP55066 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NcanP55066 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NcanP55066 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NcanP55066 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NcanP55066 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NcanP55066 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.6□□□□□ -0.39
NcanP55066 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NcanP55066 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.6□□□□□ -0.39
NcanP55066 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.6□□□□□ -0.39
NcanP55066 Gm24809-201ENSMUST00000175318 271 ntBASIC12.6□□□□□ -0.39
NcanP55066 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.6□□□□□ -0.39
NcanP55066 Gm43547-201ENSMUST00000197729 328 ntBASIC12.6□□□□□ -0.39
NcanP55066 Gm7238-201ENSMUST00000206467 973 ntBASIC12.6□□□□□ -0.39
NcanP55066 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.6□□□□□ -0.39
NcanP55066 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NcanP55066 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
NcanP55066 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.6□□□□□ -0.39
NcanP55066 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NcanP55066 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms