Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Msh6P54276 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.15■□□□□ 0.02
Msh6P54276 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.15■□□□□ 0.02
Msh6P54276 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC15.15■□□□□ 0.02
Msh6P54276 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.15■□□□□ 0.02
Msh6P54276 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Msh6P54276 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.15■□□□□ 0.02
Msh6P54276 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.15■□□□□ 0.02
Msh6P54276 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Msh6P54276 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Msh6P54276 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh6P54276 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Msh6P54276 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Msh6P54276 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh6P54276 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh6P54276 Gm14942-201ENSMUST00000119642 336 ntBASIC15.14■□□□□ 0.01
Msh6P54276 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.14■□□□□ 0.01
Msh6P54276 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC15.14■□□□□ 0.01
Msh6P54276 Gm12407-201ENSMUST00000180219 324 ntBASIC15.14■□□□□ 0.01
Msh6P54276 Gm17877-201ENSMUST00000192578 814 ntBASIC15.14■□□□□ 0.01
Msh6P54276 Gm5100-201ENSMUST00000195631 589 ntBASIC15.14■□□□□ 0.01
Msh6P54276 Gm44506-201ENSMUST00000206278 965 ntBASIC15.14■□□□□ 0.01
Msh6P54276 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.14■□□□□ 0.01
Msh6P54276 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh6P54276 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Msh6P54276 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Msh6P54276 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh6P54276 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh6P54276 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Msh6P54276 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Msh6P54276 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
Msh6P54276 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Msh6P54276 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Msh6P54276 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Gm13600-201ENSMUST00000117949 744 ntBASIC15.13■□□□□ 0.01
Msh6P54276 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Msh6P54276 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Msh6P54276 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.13■□□□□ 0.01
Msh6P54276 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Msh6P54276 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Gm3619-201ENSMUST00000219947 775 ntBASIC15.13■□□□□ 0.01
Msh6P54276 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Msh6P54276 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Msh6P54276 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.13■□□□□ 0.01
Msh6P54276 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.13■□□□□ 0.01
Msh6P54276 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Msh6P54276 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Msh6P54276 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Msh6P54276 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Msh6P54276 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Msh6P54276 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC15.12■□□□□ 0.01
Msh6P54276 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Gm13047-201ENSMUST00000117116 815 ntBASIC15.12■□□□□ 0.01
Msh6P54276 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.12■□□□□ 0.01
Msh6P54276 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC15.12■□□□□ 0.01
Msh6P54276 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Gm8531-201ENSMUST00000188319 893 ntBASIC15.12■□□□□ 0.01
Msh6P54276 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC15.12■□□□□ 0.01
Msh6P54276 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.12■□□□□ 0.01
Msh6P54276 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msh6P54276 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.12■□□□□ 0.01
Msh6P54276 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Msh6P54276 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh6P54276 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms