Protein–RNA interactions for Protein: P21841

Sftpc, Pulmonary surfactant-associated protein C, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpcP21841 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
SftpcP21841 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.87□□□□□ -0.67
SftpcP21841 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SftpcP21841 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Gm12516-201ENSMUST00000120819 385 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.87□□□□□ -0.67
SftpcP21841 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.87□□□□□ -0.67
SftpcP21841 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SftpcP21841 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Mir7221-201ENSMUST00000184009 72 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Gm45398-201ENSMUST00000210561 165 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SftpcP21841 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SftpcP21841 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SftpcP21841 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.87□□□□□ -0.67
SftpcP21841 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
SftpcP21841 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SftpcP21841 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.86□□□□□ -0.67
SftpcP21841 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SftpcP21841 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SftpcP21841 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.86□□□□□ -0.67
SftpcP21841 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SftpcP21841 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.86□□□□□ -0.67
SftpcP21841 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.86□□□□□ -0.67
SftpcP21841 Gm25881-201ENSMUST00000157783 103 ntBASIC10.86□□□□□ -0.67
SftpcP21841 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpcP21841 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.86□□□□□ -0.67
SftpcP21841 Gm25072-201ENSMUST00000175233 235 ntBASIC10.86□□□□□ -0.67
SftpcP21841 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SftpcP21841 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.86□□□□□ -0.67
SftpcP21841 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.86□□□□□ -0.67
SftpcP21841 Gm9132-201ENSMUST00000210182 832 ntBASIC10.86□□□□□ -0.67
SftpcP21841 Gm17827-201ENSMUST00000211825 742 ntBASIC10.86□□□□□ -0.67
SftpcP21841 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
SftpcP21841 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.86□□□□□ -0.67
SftpcP21841 Gm270-201ENSMUST00000223010 976 ntBASIC10.86□□□□□ -0.67
SftpcP21841 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms