Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxb3P09026 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb3P09026 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.15□□□□□ -0.46
Hoxb3P09026 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hoxb3P09026 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxb3P09026 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Hoxb3P09026 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxb3P09026 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxb3P09026 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hoxb3P09026 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.15□□□□□ -0.46
Hoxb3P09026 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxb3P09026 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxb3P09026 Gm26957-201ENSMUST00000182645 977 ntBASIC12.15□□□□□ -0.46
Hoxb3P09026 Gm21139-201ENSMUST00000186594 877 ntBASIC12.15□□□□□ -0.46
Hoxb3P09026 Wbp1-209ENSMUST00000205023 716 ntBASIC12.15□□□□□ -0.46
Hoxb3P09026 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxb3P09026 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hoxb3P09026 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxb3P09026 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.15□□□□□ -0.46
Hoxb3P09026 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxb3P09026 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Hoxb3P09026 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Hoxb3P09026 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm11652-201ENSMUST00000117842 1267 ntBASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm1848-201ENSMUST00000120711 789 ntBASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm22588-201ENSMUST00000157510 140 ntBASIC12.14□□□□□ -0.47
Hoxb3P09026 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm9507-202ENSMUST00000180157 654 ntBASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm17877-201ENSMUST00000192578 814 ntBASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm44958-201ENSMUST00000203734 736 ntBASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.14□□□□□ -0.47
Hoxb3P09026 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxb3P09026 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxb3P09026 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxb3P09026 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxb3P09026 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms