Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04224 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.55□□□□□ -0.72
P04224 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04224 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04224 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.54□□□□□ -0.72
P04224 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.54□□□□□ -0.72
P04224 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.54□□□□□ -0.72
P04224 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
P04224 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.54□□□□□ -0.72
P04224 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
P04224 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Gm8805-201ENSMUST00000117848 313 ntBASIC10.54□□□□□ -0.72
P04224 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.54□□□□□ -0.72
P04224 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Gm23363-201ENSMUST00000175024 79 ntBASIC10.54□□□□□ -0.72
P04224 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.54□□□□□ -0.72
P04224 Mir6977-201ENSMUST00000184960 64 ntBASIC10.54□□□□□ -0.72
P04224 Gm10576-201ENSMUST00000191927 825 ntBASIC10.54□□□□□ -0.72
P04224 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.54□□□□□ -0.72
P04224 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.54□□□□□ -0.72
P04224 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.54□□□□□ -0.72
P04224 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.54□□□□□ -0.72
P04224 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.54□□□□□ -0.72
P04224 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
P04224 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.54□□□□□ -0.72
P04224 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.54□□□□□ -0.72
P04224 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.54□□□□□ -0.72
P04224 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
P04224 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.54□□□□□ -0.72
P04224 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
P04224 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
P04224 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
P04224 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04224 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.53□□□□□ -0.72
P04224 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
P04224 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
P04224 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
P04224 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
P04224 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.53□□□□□ -0.72
P04224 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
P04224 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
P04224 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.53□□□□□ -0.72
P04224 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Gm7488-201ENSMUST00000117148 684 ntBASIC10.53□□□□□ -0.72
P04224 Gm14760-201ENSMUST00000121831 999 ntBASIC10.53□□□□□ -0.72
P04224 Gm13123-201ENSMUST00000122173 492 ntBASIC10.53□□□□□ -0.72
P04224 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.53□□□□□ -0.72
P04224 Gm26185-201ENSMUST00000157692 266 ntBASIC10.53□□□□□ -0.72
P04224 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.53□□□□□ -0.72
P04224 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.53□□□□□ -0.72
P04224 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.53□□□□□ -0.72
P04224 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms