Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Smarce1O54941 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarce1O54941 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarce1O54941 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smarce1O54941 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarce1O54941 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.26□□□□□ -0.13
Smarce1O54941 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Smarce1O54941 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarce1O54941 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarce1O54941 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Smarce1O54941 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.26□□□□□ -0.13
Smarce1O54941 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.26□□□□□ -0.13
Smarce1O54941 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarce1O54941 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarce1O54941 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarce1O54941 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarce1O54941 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smarce1O54941 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smarce1O54941 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarce1O54941 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.25□□□□□ -0.13
Smarce1O54941 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarce1O54941 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.25□□□□□ -0.13
Smarce1O54941 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.25□□□□□ -0.13
Smarce1O54941 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.25□□□□□ -0.13
Smarce1O54941 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Gm27514-201ENSMUST00000183692 110 ntBASIC14.25□□□□□ -0.13
Smarce1O54941 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.25□□□□□ -0.13
Smarce1O54941 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarce1O54941 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smarce1O54941 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smarce1O54941 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.25□□□□□ -0.13
Smarce1O54941 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.25□□□□□ -0.13
Smarce1O54941 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarce1O54941 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarce1O54941 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.24□□□□□ -0.13
Smarce1O54941 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarce1O54941 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.24□□□□□ -0.13
Smarce1O54941 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Gm14832-201ENSMUST00000121289 322 ntBASIC14.24□□□□□ -0.13
Smarce1O54941 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smarce1O54941 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarce1O54941 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarce1O54941 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.24□□□□□ -0.13
Smarce1O54941 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarce1O54941 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms