Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.38□□□□□ -0.43
Sdc4O35988 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.38□□□□□ -0.43
Sdc4O35988 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Sdc4O35988 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sdc4O35988 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sdc4O35988 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sdc4O35988 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Sdc4O35988 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Sdc4O35988 Gm11663-201ENSMUST00000117888 290 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.37□□□□□ -0.43
Sdc4O35988 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Gm8566-201ENSMUST00000120174 465 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.37□□□□□ -0.43
Sdc4O35988 Gm5706-201ENSMUST00000181525 993 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.37□□□□□ -0.43
Sdc4O35988 Gm5733-201ENSMUST00000190232 939 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.37□□□□□ -0.43
Sdc4O35988 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Gm9797-202ENSMUST00000218003 294 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.37□□□□□ -0.43
Sdc4O35988 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sdc4O35988 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sdc4O35988 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Sdc4O35988 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Sdc4O35988 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.36□□□□□ -0.43
Sdc4O35988 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sdc4O35988 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sdc4O35988 Gm13408-201ENSMUST00000119822 798 ntBASIC12.36□□□□□ -0.43
Sdc4O35988 Gm15432-201ENSMUST00000121106 195 ntBASIC12.36□□□□□ -0.43
Sdc4O35988 Gm13935-201ENSMUST00000121859 798 ntBASIC12.36□□□□□ -0.43
Sdc4O35988 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.36□□□□□ -0.43
Sdc4O35988 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sdc4O35988 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.36□□□□□ -0.43
Sdc4O35988 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.36□□□□□ -0.43
Sdc4O35988 Gm19353-201ENSMUST00000184561 445 ntBASIC12.36□□□□□ -0.43
Sdc4O35988 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.36□□□□□ -0.43
Sdc4O35988 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.36□□□□□ -0.43
Sdc4O35988 Gm19287-201ENSMUST00000203190 358 ntBASIC12.36□□□□□ -0.43
Sdc4O35988 Gm2553-201ENSMUST00000215986 605 ntBASIC12.36□□□□□ -0.43
Sdc4O35988 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.36□□□□□ -0.43
Sdc4O35988 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.36□□□□□ -0.43
Sdc4O35988 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.36□□□□□ -0.43
Sdc4O35988 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Sdc4O35988 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sdc4O35988 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms