Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Gm12164-201ENSMUST00000121695 551 ntBASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Olfr284-202ENSMUST00000206647 966 ntBASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Gm7046-201ENSMUST00000221351 977 ntBASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh9F8VPK8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Gm25214-201ENSMUST00000104573 129 ntBASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Gm11531-201ENSMUST00000117614 555 ntBASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Gm37489-201ENSMUST00000191883 159 ntBASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Gm18935-201ENSMUST00000212692 664 ntBASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Gm7399-201ENSMUST00000032395 858 ntBASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh9F8VPK8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh9F8VPK8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh9F8VPK8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh9F8VPK8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh9F8VPK8 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh9F8VPK8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh9F8VPK8 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh9F8VPK8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh9F8VPK8 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms