Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Gm8652-201ENSMUST00000181363 964 ntBASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Gm9136-201ENSMUST00000193368 454 ntBASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Gm45384-201ENSMUST00000210451 277 ntBASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Thumpd1Q99J36 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Thumpd1Q99J36 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Gm5866-201ENSMUST00000177881 973 ntBASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Gm27892-201ENSMUST00000185017 106 ntBASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Gm39404-201ENSMUST00000216350 313 ntBASIC10.7□□□□□ -0.7
Thumpd1Q99J36 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Gm10268-201ENSMUST00000085340 555 ntBASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Thumpd1Q99J36 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Thumpd1Q99J36 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms