Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm23912-201ENSMUST00000104687 87 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm5070-201ENSMUST00000177599 862 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm25890-201ENSMUST00000177643 165 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm22614-201ENSMUST00000178300 165 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm9230-201ENSMUST00000188228 532 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm19187-201ENSMUST00000206781 892 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm6082-201ENSMUST00000215204 454 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm22042-201ENSMUST00000082989 165 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm26110-201ENSMUST00000083971 165 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rfwd3Q8CIK8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm26083-201ENSMUST00000157904 193 ntBASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm18711-201ENSMUST00000199341 750 ntBASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm42599-201ENSMUST00000201308 469 ntBASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rfwd3Q8CIK8 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rfwd3Q8CIK8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms