Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Rprl1-201ENSMUST00000158050 327 ntBASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm19459-201ENSMUST00000176240 835 ntBASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm8100-201ENSMUST00000182906 988 ntBASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm43916-201ENSMUST00000205062 967 ntBASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm44545-201ENSMUST00000208262 746 ntBASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp1Q8BJQ2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Usp1Q8BJQ2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Usp1Q8BJQ2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp1Q8BJQ2 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Gm26286-201ENSMUST00000104166 134 ntBASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Gm23912-201ENSMUST00000104687 87 ntBASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Gm5733-201ENSMUST00000190232 939 ntBASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Ginm1-202ENSMUST00000065124 300 ntBASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp1Q8BJQ2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Gm7722-201ENSMUST00000120646 741 ntBASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Gm44126-201ENSMUST00000204831 514 ntBASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp1Q8BJQ2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms