Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Gm1848-201ENSMUST00000120711 789 ntBASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Gm12516-201ENSMUST00000120819 385 ntBASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Gm5706-201ENSMUST00000181525 993 ntBASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Gm4654-201ENSMUST00000183305 982 ntBASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.29□□□□□ -0.28
Usp6nlQ80XC3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Gm11836-201ENSMUST00000121022 441 ntBASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Gm6485-201ENSMUST00000160676 439 ntBASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Gm25072-201ENSMUST00000175233 235 ntBASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Gm8492-201ENSMUST00000182375 987 ntBASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Mir6998-201ENSMUST00000183343 64 ntBASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Gm9645-201ENSMUST00000197131 792 ntBASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp6nlQ80XC3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms