Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Gm807-202ENSMUST00000224929 408 ntBASIC14.61□□□□□ -0.07
Nphp3Q7TNH6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nphp3Q7TNH6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nphp3Q7TNH6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nphp3Q7TNH6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nphp3Q7TNH6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nphp3Q7TNH6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nphp3Q7TNH6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Gm25881-201ENSMUST00000157783 103 ntBASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Gm21811-201ENSMUST00000096485 930 ntBASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nphp3Q7TNH6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Map1b-203ENSMUST00000223725 2669 ntBASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm8566-201ENSMUST00000120174 465 ntBASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm4482-201ENSMUST00000200876 742 ntBASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm9555-201ENSMUST00000200908 583 ntBASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm9797-202ENSMUST00000218003 294 ntBASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.59□□□□□ -0.07
Nphp3Q7TNH6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nphp3Q7TNH6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nphp3Q7TNH6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nphp3Q7TNH6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nphp3Q7TNH6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nphp3Q7TNH6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nphp3Q7TNH6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Gm14058-201ENSMUST00000116082 735 ntBASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Gm7851-201ENSMUST00000117574 323 ntBASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Gm14724-201ENSMUST00000118400 537 ntBASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Gm11941-201ENSMUST00000119904 610 ntBASIC14.58□□□□□ -0.08
Nphp3Q7TNH6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms