Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ubfd1Q78JW9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Gm12165-201ENSMUST00000117047 342 ntBASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Gm14263-201ENSMUST00000117955 746 ntBASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Gm19353-201ENSMUST00000184561 445 ntBASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Gm17931-201ENSMUST00000208132 634 ntBASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ubfd1Q78JW9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Gm13408-201ENSMUST00000119822 798 ntBASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Gm13935-201ENSMUST00000121859 798 ntBASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Ntng1-201ENSMUST00000051253 327 ntBASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Cog3-203ENSMUST00000227473 4197 ntBASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.72□□□□□ -0.53
Ubfd1Q78JW9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms