Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm22711-201ENSMUST00000116890 133 ntBASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm18944-201ENSMUST00000207672 643 ntBASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 n-R5s185-201ENSMUST00000083953 119 ntBASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scaf8Q6DID3 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm15207-201ENSMUST00000119259 442 ntBASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm5714-201ENSMUST00000197343 566 ntBASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm40332-201ENSMUST00000199847 938 ntBASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm5805-201ENSMUST00000072779 456 ntBASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.15□□□□□ -0.14
Scaf8Q6DID3 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Scaf8Q6DID3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Scaf8Q6DID3 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scaf8Q6DID3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.14□□□□□ -0.15
Scaf8Q6DID3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf8Q6DID3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.14□□□□□ -0.15
Scaf8Q6DID3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf8Q6DID3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf8Q6DID3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf8Q6DID3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf8Q6DID3 Grk6-205ENSMUST00000224653 2976 ntBASIC14.14□□□□□ -0.15
Scaf8Q6DID3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scaf8Q6DID3 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms