Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gli3Q61602 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Gli3Q61602 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gli3Q61602 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC15.8■□□□□ 0.12
Gli3Q61602 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gli3Q61602 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gli3Q61602 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gli3Q61602 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gli3Q61602 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gli3Q61602 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gli3Q61602 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Gli3Q61602 Gm16210-201ENSMUST00000122161 610 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 Gm19013-201ENSMUST00000183895 1222 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 Gm19014-201ENSMUST00000184828 1189 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC15.79■□□□□ 0.12
Gli3Q61602 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC15.79■□□□□ 0.12
Gli3Q61602 Gm5292-201ENSMUST00000073317 580 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Gli3Q61602 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Gli3Q61602 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Gm5740-201ENSMUST00000211003 1857 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Gm9133-201ENSMUST00000118289 540 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 AC153153.1-201ENSMUST00000225803 793 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 AC154407.1-201ENSMUST00000226777 526 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Gli3Q61602 Gm16477-201ENSMUST00000085365 801 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 Gm17415-201ENSMUST00000096427 789 ntBASIC15.79■□□□□ 0.12
Gli3Q61602 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Gli3Q61602 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Gli3Q61602 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Gli3Q61602 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Gli3Q61602 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Gli3Q61602 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Gm8659-201ENSMUST00000120024 1084 ntBASIC15.78■□□□□ 0.12
Gli3Q61602 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC15.78■□□□□ 0.12
Gli3Q61602 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Gli3Q61602 Gm6794-201ENSMUST00000203829 457 ntBASIC15.78■□□□□ 0.12
Gli3Q61602 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC15.78■□□□□ 0.12
Gli3Q61602 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Gli3Q61602 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Gli3Q61602 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Gli3Q61602 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.77■□□□□ 0.12
Gli3Q61602 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gli3Q61602 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gli3Q61602 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gli3Q61602 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Gli3Q61602 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gli3Q61602 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gli3Q61602 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gli3Q61602 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gli3Q61602 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Gli3Q61602 Gm25148-201ENSMUST00000104611 123 ntBASIC15.77■□□□□ 0.11
Gli3Q61602 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
Gli3Q61602 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC15.77■□□□□ 0.11
Gli3Q61602 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC15.77■□□□□ 0.11
Gli3Q61602 BB187690-201ENSMUST00000198619 1176 ntBASIC15.77■□□□□ 0.11
Gli3Q61602 Gm40332-201ENSMUST00000199847 938 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms