Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm38158-201ENSMUST00000194617 339 ntBASIC11.9□□□□□ -0.5
Scn2bQ56A07 Gm44364-201ENSMUST00000198368 141 ntBASIC11.9□□□□□ -0.5
Scn2bQ56A07 Gm43179-201ENSMUST00000198797 275 ntBASIC11.9□□□□□ -0.5
Scn2bQ56A07 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn2bQ56A07 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.9□□□□□ -0.5
Scn2bQ56A07 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn2bQ56A07 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.9□□□□□ -0.5
Scn2bQ56A07 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scn2bQ56A07 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn2bQ56A07 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Scn2bQ56A07 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn2bQ56A07 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Scn2bQ56A07 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn2bQ56A07 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Scn2bQ56A07 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.89□□□□□ -0.51
Scn2bQ56A07 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm13297-201ENSMUST00000120205 934 ntBASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm14999-201ENSMUST00000121039 624 ntBASIC11.89□□□□□ -0.51
Scn2bQ56A07 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm7046-201ENSMUST00000221351 977 ntBASIC11.89□□□□□ -0.51
Scn2bQ56A07 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.89□□□□□ -0.51
Scn2bQ56A07 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scn2bQ56A07 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scn2bQ56A07 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms