Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm11434-201ENSMUST00000122379 629 ntBASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm8194-201ENSMUST00000159783 859 ntBASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm23771-201ENSMUST00000178702 110 ntBASIC12.28□□□□□ -0.44
Spire1Q52KF3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm2517-201ENSMUST00000215651 348 ntBASIC12.28□□□□□ -0.44
Spire1Q52KF3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.28□□□□□ -0.44
Spire1Q52KF3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spire1Q52KF3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Spire1Q52KF3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.27□□□□□ -0.44
Spire1Q52KF3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.27□□□□□ -0.44
Spire1Q52KF3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spire1Q52KF3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 Gm22138-201ENSMUST00000158748 128 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Gm21092-201ENSMUST00000178995 955 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 Mir7076-201ENSMUST00000183519 74 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 Gm6108-201ENSMUST00000208365 367 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.27□□□□□ -0.45
Spire1Q52KF3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Spire1Q52KF3 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms