Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Lig3P97386 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.22□□□□□ -0.29
Lig3P97386 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.22□□□□□ -0.29
Lig3P97386 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lig3P97386 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.22□□□□□ -0.29
Lig3P97386 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lig3P97386 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lig3P97386 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lig3P97386 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.21□□□□□ -0.29
Lig3P97386 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lig3P97386 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Lig3P97386 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.21□□□□□ -0.29
Lig3P97386 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.21□□□□□ -0.29
Lig3P97386 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.21□□□□□ -0.29
Lig3P97386 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
Lig3P97386 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.21□□□□□ -0.29
Lig3P97386 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.21□□□□□ -0.29
Lig3P97386 Gm7003-201ENSMUST00000195089 312 ntBASIC13.21□□□□□ -0.29
Lig3P97386 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.21□□□□□ -0.29
Lig3P97386 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.21□□□□□ -0.29
Lig3P97386 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Gm22058-201ENSMUST00000083393 310 ntBASIC13.21□□□□□ -0.29
Lig3P97386 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lig3P97386 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lig3P97386 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lig3P97386 Daam2-202ENSMUST00000224595 1926 ntBASIC13.21□□□□□ -0.3
Lig3P97386 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lig3P97386 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lig3P97386 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.21□□□□□ -0.3
Lig3P97386 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lig3P97386 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lig3P97386 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.2□□□□□ -0.3
Lig3P97386 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.2□□□□□ -0.3
Lig3P97386 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.2□□□□□ -0.3
Lig3P97386 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.2□□□□□ -0.3
Lig3P97386 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.2□□□□□ -0.3
Lig3P97386 Gm13492-201ENSMUST00000119772 665 ntBASIC13.2□□□□□ -0.3
Lig3P97386 Gm11667-201ENSMUST00000119828 486 ntBASIC13.2□□□□□ -0.3
Lig3P97386 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.2□□□□□ -0.3
Lig3P97386 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.2□□□□□ -0.3
Lig3P97386 Rprl1-202ENSMUST00000198476 238 ntBASIC13.2□□□□□ -0.3
Lig3P97386 Gm9555-201ENSMUST00000200908 583 ntBASIC13.2□□□□□ -0.3
Lig3P97386 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.2□□□□□ -0.3
Lig3P97386 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.2□□□□□ -0.3
Lig3P97386 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.2□□□□□ -0.3
Lig3P97386 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Lig3P97386 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Lig3P97386 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.2□□□□□ -0.3
Lig3P97386 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.2□□□□□ -0.3
Lig3P97386 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.2□□□□□ -0.3
Lig3P97386 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lig3P97386 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lig3P97386 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lig3P97386 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lig3P97386 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.19□□□□□ -0.3
Lig3P97386 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.19□□□□□ -0.3
Lig3P97386 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lig3P97386 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms