Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Lmo4P61969 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Cog3-203ENSMUST00000227473 4197 ntBASIC9.71□□□□□ -0.86
Lmo4P61969 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.71□□□□□ -0.86
Lmo4P61969 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Lmo4P61969 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.71□□□□□ -0.86
Lmo4P61969 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Lmo4P61969 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Lmo4P61969 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Lmo4P61969 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Lmo4P61969 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.7□□□□□ -0.86
Lmo4P61969 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Gm11949-201ENSMUST00000117640 372 ntBASIC9.7□□□□□ -0.86
Lmo4P61969 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.7□□□□□ -0.86
Lmo4P61969 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Lmo4P61969 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Lmo4P61969 Gm43186-201ENSMUST00000198130 824 ntBASIC9.7□□□□□ -0.86
Lmo4P61969 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.7□□□□□ -0.86
Lmo4P61969 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.7□□□□□ -0.86
Lmo4P61969 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.7□□□□□ -0.86
Lmo4P61969 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.7□□□□□ -0.86
Lmo4P61969 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC9.7□□□□□ -0.86
Lmo4P61969 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Lmo4P61969 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.7□□□□□ -0.86
Lmo4P61969 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.7□□□□□ -0.86
Lmo4P61969 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.7□□□□□ -0.86
Lmo4P61969 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lmo4P61969 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Lmo4P61969 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC9.69□□□□□ -0.86
Lmo4P61969 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Lmo4P61969 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Lmo4P61969 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Lmo4P61969 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Lmo4P61969 Gm12036-201ENSMUST00000120008 530 ntBASIC9.69□□□□□ -0.86
Lmo4P61969 Gm11246-201ENSMUST00000120880 345 ntBASIC9.69□□□□□ -0.86
Lmo4P61969 Gm11836-201ENSMUST00000121022 441 ntBASIC9.69□□□□□ -0.86
Lmo4P61969 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.69□□□□□ -0.86
Lmo4P61969 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.69□□□□□ -0.86
Lmo4P61969 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Lmo4P61969 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.69□□□□□ -0.86
Lmo4P61969 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Lmo4P61969 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lmo4P61969 Gm24844-201ENSMUST00000158679 127 ntBASIC9.69□□□□□ -0.86
Lmo4P61969 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Lmo4P61969 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.69□□□□□ -0.86
Lmo4P61969 Gm23771-201ENSMUST00000178702 110 ntBASIC9.69□□□□□ -0.86
Lmo4P61969 Gm9192-201ENSMUST00000183221 985 ntBASIC9.69□□□□□ -0.86
Lmo4P61969 Gm4654-201ENSMUST00000183305 982 ntBASIC9.69□□□□□ -0.86
Lmo4P61969 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.69□□□□□ -0.86
Lmo4P61969 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.69□□□□□ -0.86
Lmo4P61969 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms