Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Sox3P53784 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.57□□□□□ -0.56
Sox3P53784 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox3P53784 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.57□□□□□ -0.56
Sox3P53784 Gm13492-201ENSMUST00000119772 665 ntBASIC11.57□□□□□ -0.56
Sox3P53784 Gm6963-201ENSMUST00000147879 379 ntBASIC11.57□□□□□ -0.56
Sox3P53784 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Gm45550-201ENSMUST00000209380 946 ntBASIC11.57□□□□□ -0.56
Sox3P53784 Gm5369-201ENSMUST00000217499 588 ntBASIC11.57□□□□□ -0.56
Sox3P53784 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Sox3P53784 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox3P53784 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.57□□□□□ -0.56
Sox3P53784 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sox3P53784 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Sox3P53784 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox3P53784 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sox3P53784 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.57□□□□□ -0.56
Sox3P53784 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox3P53784 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox3P53784 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Sox3P53784 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox3P53784 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox3P53784 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox3P53784 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.56□□□□□ -0.56
Sox3P53784 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox3P53784 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sox3P53784 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox3P53784 Gm9358-201ENSMUST00000183067 927 ntBASIC11.56□□□□□ -0.56
Sox3P53784 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Gm37905-201ENSMUST00000195310 341 ntBASIC11.56□□□□□ -0.56
Sox3P53784 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.56□□□□□ -0.56
Sox3P53784 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox3P53784 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox3P53784 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox3P53784 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox3P53784 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms