Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm13608-201ENSMUST00000121807 1406 ntBASIC17.64■□□□□ 0.42
Chd1P40201 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chd1P40201 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chd1P40201 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Gm16441-201ENSMUST00000138176 924 ntBASIC17.64■□□□□ 0.41
Chd1P40201 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC17.64■□□□□ 0.41
Chd1P40201 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC17.64■□□□□ 0.41
Chd1P40201 Gm26957-201ENSMUST00000182645 977 ntBASIC17.64■□□□□ 0.41
Chd1P40201 Gm7445-201ENSMUST00000192115 340 ntBASIC17.64■□□□□ 0.41
Chd1P40201 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC17.64■□□□□ 0.41
Chd1P40201 Gm9915-201ENSMUST00000066196 1383 ntBASIC17.64■□□□□ 0.41
Chd1P40201 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Chd1P40201 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chd1P40201 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Gm5171-201ENSMUST00000214944 1415 ntBASIC17.64■□□□□ 0.41
Chd1P40201 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Chd1P40201 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd1P40201 Gm7928-201ENSMUST00000181249 701 ntBASIC17.64■□□□□ 0.41
Chd1P40201 Gm37688-201ENSMUST00000195195 465 ntBASIC17.64■□□□□ 0.41
Chd1P40201 AC153929.1-201ENSMUST00000219009 303 ntBASIC17.64■□□□□ 0.41
Chd1P40201 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Chd1P40201 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC17.63■□□□□ 0.41
Chd1P40201 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.63■□□□□ 0.41
Chd1P40201 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chd1P40201 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chd1P40201 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chd1P40201 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chd1P40201 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chd1P40201 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chd1P40201 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Gm16165-201ENSMUST00000160140 795 ntBASIC17.63■□□□□ 0.41
Chd1P40201 Gm38103-201ENSMUST00000191707 864 ntBASIC17.63■□□□□ 0.41
Chd1P40201 Gm6653-201ENSMUST00000218063 1288 ntBASIC17.63■□□□□ 0.41
Chd1P40201 AC154461.1-201ENSMUST00000224207 1005 ntBASIC17.63■□□□□ 0.41
Chd1P40201 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd1P40201 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC17.62■□□□□ 0.41
Chd1P40201 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC17.62■□□□□ 0.41
Chd1P40201 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC17.62■□□□□ 0.41
Chd1P40201 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC17.62■□□□□ 0.41
Chd1P40201 Gm27316-201ENSMUST00000184884 277 ntBASIC17.62■□□□□ 0.41
Chd1P40201 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC17.62■□□□□ 0.41
Chd1P40201 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC17.62■□□□□ 0.41
Chd1P40201 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chd1P40201 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC17.62■□□□□ 0.41
Chd1P40201 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chd1P40201 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC17.62■□□□□ 0.41
Chd1P40201 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd1P40201 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms