Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Hoxc9P09633 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Hoxc9P09633 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Hoxc9P09633 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hoxc9P09633 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Hoxc9P09633 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Gm9089-201ENSMUST00000122027 526 ntBASIC15.5■□□□□ 0.07
Hoxc9P09633 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.5■□□□□ 0.07
Hoxc9P09633 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Gm19091-201ENSMUST00000208120 978 ntBASIC15.5■□□□□ 0.07
Hoxc9P09633 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Hoxc9P09633 AC134869.4-202ENSMUST00000224350 837 ntBASIC15.5■□□□□ 0.07
Hoxc9P09633 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.5■□□□□ 0.07
Hoxc9P09633 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.5■□□□□ 0.07
Hoxc9P09633 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.5■□□□□ 0.07
Hoxc9P09633 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Hoxc9P09633 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.5■□□□□ 0.07
Hoxc9P09633 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hoxc9P09633 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Hoxc9P09633 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Gm11244-201ENSMUST00000121243 237 ntBASIC15.49■□□□□ 0.07
Hoxc9P09633 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC15.49■□□□□ 0.07
Hoxc9P09633 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Gm24398-201ENSMUST00000157870 109 ntBASIC15.49■□□□□ 0.07
Hoxc9P09633 Gm6114-201ENSMUST00000182472 968 ntBASIC15.49■□□□□ 0.07
Hoxc9P09633 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.49■□□□□ 0.07
Hoxc9P09633 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.49■□□□□ 0.07
Hoxc9P09633 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.49■□□□□ 0.07
Hoxc9P09633 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Hoxc9P09633 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.49■□□□□ 0.07
Hoxc9P09633 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Hoxc9P09633 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
Hoxc9P09633 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC15.48■□□□□ 0.07
Hoxc9P09633 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Mir8093-201ENSMUST00000185043 137 ntBASIC15.48■□□□□ 0.07
Hoxc9P09633 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
Hoxc9P09633 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hoxc9P09633 Gm3619-201ENSMUST00000219947 775 ntBASIC15.48■□□□□ 0.07
Hoxc9P09633 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms