Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mir7677-201ENSMUST00000184226 67 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Gm18038-201ENSMUST00000197900 485 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.01□□□□□ -0.33
Vti1aO89116 Gm17827-201ENSMUST00000211825 742 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.01□□□□□ -0.33
Vti1aO89116 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.01□□□□□ -0.33
Vti1aO89116 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Vti1aO89116 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Ntng1-201ENSMUST00000051253 327 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vti1aO89116 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vti1aO89116 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.01□□□□□ -0.33
Vti1aO89116 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vti1aO89116 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.01□□□□□ -0.33
Vti1aO89116 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vti1aO89116 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vti1aO89116 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13□□□□□ -0.33
Vti1aO89116 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13□□□□□ -0.33
Vti1aO89116 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Mir7032-201ENSMUST00000185154 79 ntBASIC13□□□□□ -0.33
Vti1aO89116 Gm7467-201ENSMUST00000185173 652 ntBASIC13□□□□□ -0.33
Vti1aO89116 AC098716.1-201ENSMUST00000213527 703 ntBASIC13□□□□□ -0.33
Vti1aO89116 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13□□□□□ -0.33
Vti1aO89116 Gm18556-201ENSMUST00000219748 1031 ntBASIC13□□□□□ -0.33
Vti1aO89116 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vti1aO89116 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vti1aO89116 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vti1aO89116 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13□□□□□ -0.33
Vti1aO89116 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13□□□□□ -0.33
Vti1aO89116 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vti1aO89116 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13□□□□□ -0.33
Vti1aO89116 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Vti1aO89116 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.99□□□□□ -0.33
Vti1aO89116 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Vti1aO89116 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.99□□□□□ -0.33
Vti1aO89116 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vti1aO89116 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.99□□□□□ -0.33
Vti1aO89116 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Gm14058-201ENSMUST00000116082 735 ntBASIC12.99□□□□□ -0.33
Vti1aO89116 Gm12165-201ENSMUST00000117047 342 ntBASIC12.99□□□□□ -0.33
Vti1aO89116 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.99□□□□□ -0.33
Vti1aO89116 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.99□□□□□ -0.33
Vti1aO89116 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.99□□□□□ -0.33
Vti1aO89116 Gm37835-201ENSMUST00000193305 361 ntBASIC12.99□□□□□ -0.33
Vti1aO89116 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.99□□□□□ -0.33
Vti1aO89116 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vti1aO89116 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.99□□□□□ -0.33
Vti1aO89116 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms