Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm28043E0CXC2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.11□□□□□ -0.47
Gm28043E0CXC2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Gm38002-201ENSMUST00000193255 180 ntBASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Gm45930-201ENSMUST00000221330 292 ntBASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Gm8227-201ENSMUST00000223306 571 ntBASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28043E0CXC2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Mir1247-201ENSMUST00000116706 82 ntBASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm43133-201ENSMUST00000197472 463 ntBASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm35960-201ENSMUST00000202712 767 ntBASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm5904-201ENSMUST00000210286 865 ntBASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm28043E0CXC2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Gm28043E0CXC2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm28043E0CXC2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms