Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Gm5451-201ENSMUST00000080545 579 ntBASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-4Q9EQM3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gm5700-201ENSMUST00000191483 989 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gm42816-201ENSMUST00000198433 325 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gm18968-201ENSMUST00000221319 862 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Olfr584-201ENSMUST00000098210 964 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.34□□□□□ -0.43
Nkx2-4Q9EQM3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Nkx2-4Q9EQM3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx2-4Q9EQM3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx2-4Q9EQM3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.33□□□□□ -0.43
Nkx2-4Q9EQM3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx2-4Q9EQM3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm14892-201ENSMUST00000117636 267 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm14270-201ENSMUST00000118388 846 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13019-201ENSMUST00000120000 276 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm18561-201ENSMUST00000206027 804 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm6108-201ENSMUST00000208365 367 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-4Q9EQM3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms