Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Gm9630-201ENSMUST00000178304 885 ntBASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Gm37678-201ENSMUST00000192908 1146 ntBASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Gm43867-201ENSMUST00000203860 525 ntBASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Gm5950-201ENSMUST00000213337 772 ntBASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 AC132237.2-201ENSMUST00000221702 1209 ntBASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 AC154361.1-201ENSMUST00000225694 745 ntBASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Morn2-202ENSMUST00000227729 656 ntBASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Gm37891-201ENSMUST00000195585 1326 ntBASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retreg3Q9CQV4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Retreg3Q9CQV4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retreg3Q9CQV4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retreg3Q9CQV4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retreg3Q9CQV4 Gm11531-201ENSMUST00000117614 555 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm11222-201ENSMUST00000119005 738 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm23119-201ENSMUST00000158610 140 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm2991-201ENSMUST00000173338 480 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm33571-201ENSMUST00000193271 657 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm18382-201ENSMUST00000194394 582 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm42937-201ENSMUST00000197360 752 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm44124-201ENSMUST00000204159 472 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm5363-201ENSMUST00000211927 938 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm24136-201ENSMUST00000083374 165 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Gm42462-201ENSMUST00000196543 1363 ntBASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retreg3Q9CQV4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Gm17075-201ENSMUST00000171924 670 ntBASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Mir5132-201ENSMUST00000175166 71 ntBASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Mir3547-201ENSMUST00000175461 88 ntBASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Mir669a-7-201ENSMUST00000180364 87 ntBASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Mir669a-6-201ENSMUST00000196127 87 ntBASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Mir669a-12-201ENSMUST00000197274 87 ntBASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Mir669a-5-201ENSMUST00000197439 87 ntBASIC12.51□□□□□ -0.41
Retreg3Q9CQV4 Mir669a-10-201ENSMUST00000197745 87 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms