Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm44364-201ENSMUST00000198368 141 ntBASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm18893-201ENSMUST00000198416 943 ntBASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm3961-201ENSMUST00000204425 994 ntBASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb1Q91Y08 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb1Q91Y08 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb1Q91Y08 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb1Q91Y08 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb1Q91Y08 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb1Q91Y08 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Pcdhb1Q91Y08 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhb1Q91Y08 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb1Q91Y08 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb1Q91Y08 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Gm24255-201ENSMUST00000104481 128 ntBASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Gm43758-201ENSMUST00000199500 367 ntBASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb1Q91Y08 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Rprl1-202ENSMUST00000198476 238 ntBASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb1Q91Y08 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms