Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh19Q80TF3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm23596-201ENSMUST00000104304 132 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm12196-201ENSMUST00000120954 262 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm11450-201ENSMUST00000121144 333 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm25881-201ENSMUST00000157783 103 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm8343-201ENSMUST00000182705 994 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm42997-202ENSMUST00000200321 985 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm4607-201ENSMUST00000206649 577 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Spcs1-203ENSMUST00000226374 592 ntBASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh19Q80TF3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Gm14058-201ENSMUST00000116082 735 ntBASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Gm9062-201ENSMUST00000117712 727 ntBASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Gm22902-201ENSMUST00000158488 302 ntBASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Gm37986-201ENSMUST00000193285 383 ntBASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms