Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.5□□□□□ -0.57
Rai1Q61818 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Rai1Q61818 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.5□□□□□ -0.57
Rai1Q61818 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.5□□□□□ -0.57
Rai1Q61818 Gm5996-201ENSMUST00000211110 718 ntBASIC11.5□□□□□ -0.57
Rai1Q61818 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.5□□□□□ -0.57
Rai1Q61818 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.5□□□□□ -0.57
Rai1Q61818 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.5□□□□□ -0.57
Rai1Q61818 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.5□□□□□ -0.57
Rai1Q61818 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rai1Q61818 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rai1Q61818 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Rai1Q61818 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rai1Q61818 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rai1Q61818 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.5□□□□□ -0.57
Rai1Q61818 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Rai1Q61818 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.5□□□□□ -0.57
Rai1Q61818 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rai1Q61818 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.5□□□□□ -0.57
Rai1Q61818 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.49□□□□□ -0.57
Rai1Q61818 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.49□□□□□ -0.57
Rai1Q61818 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.49□□□□□ -0.57
Rai1Q61818 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.49□□□□□ -0.57
Rai1Q61818 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.49□□□□□ -0.57
Rai1Q61818 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rai1Q61818 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rai1Q61818 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.49□□□□□ -0.57
Rai1Q61818 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm25951-201ENSMUST00000175330 64 ntBASIC11.49□□□□□ -0.57
Rai1Q61818 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.49□□□□□ -0.57
Rai1Q61818 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rai1Q61818 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Rai1Q61818 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.49□□□□□ -0.57
Rai1Q61818 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.49□□□□□ -0.57
Rai1Q61818 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.49□□□□□ -0.57
Rai1Q61818 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rai1Q61818 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.48□□□□□ -0.57
Rai1Q61818 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.48□□□□□ -0.57
Rai1Q61818 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Gm14807-201ENSMUST00000116640 983 ntBASIC11.48□□□□□ -0.57
Rai1Q61818 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.48□□□□□ -0.57
Rai1Q61818 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.48□□□□□ -0.57
Rai1Q61818 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.48□□□□□ -0.57
Rai1Q61818 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.48□□□□□ -0.57
Rai1Q61818 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.48□□□□□ -0.57
Rai1Q61818 Gm18463-201ENSMUST00000207258 474 ntBASIC11.48□□□□□ -0.57
Rai1Q61818 Gm18460-201ENSMUST00000208088 464 ntBASIC11.48□□□□□ -0.57
Rai1Q61818 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms