Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.91□□□□□ -0.34
VcpQ01853 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VcpQ01853 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Gm12058-201ENSMUST00000118614 437 ntBASIC12.91□□□□□ -0.34
VcpQ01853 Gm11340-201ENSMUST00000119226 412 ntBASIC12.91□□□□□ -0.34
VcpQ01853 Gm12029-201ENSMUST00000120073 832 ntBASIC12.91□□□□□ -0.34
VcpQ01853 Gm15432-201ENSMUST00000121106 195 ntBASIC12.91□□□□□ -0.34
VcpQ01853 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.91□□□□□ -0.34
VcpQ01853 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.91□□□□□ -0.34
VcpQ01853 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.91□□□□□ -0.34
VcpQ01853 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.91□□□□□ -0.34
VcpQ01853 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.91□□□□□ -0.34
VcpQ01853 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VcpQ01853 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.91□□□□□ -0.34
VcpQ01853 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VcpQ01853 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VcpQ01853 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VcpQ01853 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.9□□□□□ -0.34
VcpQ01853 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
VcpQ01853 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VcpQ01853 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.9□□□□□ -0.34
VcpQ01853 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.9□□□□□ -0.34
VcpQ01853 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Rmrp-201ENSMUST00000157463 271 ntBASIC12.9□□□□□ -0.34
VcpQ01853 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.9□□□□□ -0.34
VcpQ01853 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.9□□□□□ -0.34
VcpQ01853 Gm29155-201ENSMUST00000185910 269 ntBASIC12.9□□□□□ -0.34
VcpQ01853 Gm8365-201ENSMUST00000197334 648 ntBASIC12.9□□□□□ -0.34
VcpQ01853 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.9□□□□□ -0.34
VcpQ01853 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.9□□□□□ -0.34
VcpQ01853 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.9□□□□□ -0.34
VcpQ01853 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.9□□□□□ -0.34
VcpQ01853 Gzmn-202ENSMUST00000225535 989 ntBASIC12.9□□□□□ -0.34
VcpQ01853 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.9□□□□□ -0.34
VcpQ01853 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VcpQ01853 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VcpQ01853 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
VcpQ01853 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
VcpQ01853 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.9□□□□□ -0.35
VcpQ01853 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VcpQ01853 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.89□□□□□ -0.35
VcpQ01853 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.89□□□□□ -0.35
VcpQ01853 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.89□□□□□ -0.35
VcpQ01853 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.89□□□□□ -0.35
VcpQ01853 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VcpQ01853 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.89□□□□□ -0.35
VcpQ01853 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.89□□□□□ -0.35
VcpQ01853 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VcpQ01853 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms