Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Nkx2-3P97334 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.08■□□□□ 0
Nkx2-3P97334 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Nkx2-3P97334 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.07■□□□□ 0
Nkx2-3P97334 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.07■□□□□ 0
Nkx2-3P97334 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nkx2-3P97334 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Nkx2-3P97334 Gm12516-201ENSMUST00000120819 385 ntBASIC15.07■□□□□ 0
Nkx2-3P97334 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC15.07■□□□□ 0
Nkx2-3P97334 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC15.07■□□□□ 0
Nkx2-3P97334 Gm28324-201ENSMUST00000187913 264 ntBASIC15.07■□□□□ 0
Nkx2-3P97334 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC15.07■□□□□ 0
Nkx2-3P97334 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC15.07■□□□□ 0
Nkx2-3P97334 Gm17825-201ENSMUST00000206836 794 ntBASIC15.07■□□□□ 0
Nkx2-3P97334 Gm45594-201ENSMUST00000211717 241 ntBASIC15.07■□□□□ 0
Nkx2-3P97334 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.07■□□□□ 0
Nkx2-3P97334 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx2-3P97334 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.07■□□□□ 0
Nkx2-3P97334 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.06■□□□□ 0
Nkx2-3P97334 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nkx2-3P97334 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Gm26013-201ENSMUST00000104404 119 ntBASIC15.06■□□□□ 0
Nkx2-3P97334 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Nkx2-3P97334 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.06■□□□□ 0
Nkx2-3P97334 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.06■□□□□ 0
Nkx2-3P97334 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nkx2-3P97334 Gm17798-201ENSMUST00000182282 1035 ntBASIC15.06■□□□□ 0
Nkx2-3P97334 Gm5982-201ENSMUST00000196234 512 ntBASIC15.06■□□□□ 0
Nkx2-3P97334 Gm7504-201ENSMUST00000201449 424 ntBASIC15.06■□□□□ 0
Nkx2-3P97334 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.06■□□□□ 0
Nkx2-3P97334 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.06■□□□□ 0
Nkx2-3P97334 Prrxl1-205ENSMUST00000228878 723 ntBASIC15.06■□□□□ 0
Nkx2-3P97334 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC15.06■□□□□ 0
Nkx2-3P97334 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nkx2-3P97334 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nkx2-3P97334 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx2-3P97334 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nkx2-3P97334 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Nkx2-3P97334 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nkx2-3P97334 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nkx2-3P97334 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nkx2-3P97334 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.05■□□□□ 0
Nkx2-3P97334 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.05■□□□□ 0
Nkx2-3P97334 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Nkx2-3P97334 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nkx2-3P97334 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC15.05■□□□□ -0
Nkx2-3P97334 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Nkx2-3P97334 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Gm29410-201ENSMUST00000188383 694 ntBASIC15.05■□□□□ -0
Nkx2-3P97334 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC15.05■□□□□ -0
Nkx2-3P97334 Gm37981-201ENSMUST00000194280 535 ntBASIC15.05■□□□□ -0
Nkx2-3P97334 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Nkx2-3P97334 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.05■□□□□ -0
Nkx2-3P97334 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.05■□□□□ -0
Nkx2-3P97334 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC15.05■□□□□ -0
Nkx2-3P97334 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC15.05■□□□□ -0
Nkx2-3P97334 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC15.05■□□□□ -0
Nkx2-3P97334 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms