Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CiitaP79621 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CiitaP79621 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CiitaP79621 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CiitaP79621 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.04□□□□□ -0.32
CiitaP79621 Gm24891-201ENSMUST00000104391 136 ntBASIC13.04□□□□□ -0.32
CiitaP79621 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.04□□□□□ -0.32
CiitaP79621 Gm12165-201ENSMUST00000117047 342 ntBASIC13.04□□□□□ -0.32
CiitaP79621 Gm11663-201ENSMUST00000117888 290 ntBASIC13.04□□□□□ -0.32
CiitaP79621 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.04□□□□□ -0.32
CiitaP79621 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.04□□□□□ -0.32
CiitaP79621 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.04□□□□□ -0.32
CiitaP79621 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.04□□□□□ -0.32
CiitaP79621 Gm28686-201ENSMUST00000187404 609 ntBASIC13.04□□□□□ -0.32
CiitaP79621 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.04□□□□□ -0.32
CiitaP79621 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.04□□□□□ -0.32
CiitaP79621 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CiitaP79621 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CiitaP79621 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CiitaP79621 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CiitaP79621 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CiitaP79621 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
CiitaP79621 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CiitaP79621 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.03□□□□□ -0.32
CiitaP79621 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Gm13461-201ENSMUST00000120980 662 ntBASIC13.03□□□□□ -0.32
CiitaP79621 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CiitaP79621 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.03□□□□□ -0.32
CiitaP79621 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.03□□□□□ -0.32
CiitaP79621 Gm19287-201ENSMUST00000203190 358 ntBASIC13.03□□□□□ -0.32
CiitaP79621 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.03□□□□□ -0.32
CiitaP79621 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.03□□□□□ -0.32
CiitaP79621 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.03□□□□□ -0.32
CiitaP79621 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CiitaP79621 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Gm10288-201ENSMUST00000084614 537 ntBASIC13.03□□□□□ -0.32
CiitaP79621 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CiitaP79621 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CiitaP79621 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
CiitaP79621 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.03□□□□□ -0.32
CiitaP79621 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CiitaP79621 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.03□□□□□ -0.32
CiitaP79621 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CiitaP79621 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CiitaP79621 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CiitaP79621 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CiitaP79621 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CiitaP79621 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CiitaP79621 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
CiitaP79621 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CiitaP79621 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms