Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.35□□□□□ -0.27
Hoxc6P10629 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.35□□□□□ -0.27
Hoxc6P10629 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.34□□□□□ -0.27
Hoxc6P10629 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Hoxc6P10629 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.34□□□□□ -0.27
Hoxc6P10629 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.34□□□□□ -0.27
Hoxc6P10629 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc6P10629 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxc6P10629 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxc6P10629 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxc6P10629 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxc6P10629 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxc6P10629 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.33□□□□□ -0.27
Hoxc6P10629 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Hoxc6P10629 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.33□□□□□ -0.28
Hoxc6P10629 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.33□□□□□ -0.28
Hoxc6P10629 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hoxc6P10629 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Hoxc6P10629 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hoxc6P10629 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.33□□□□□ -0.28
Hoxc6P10629 Gm12628-201ENSMUST00000122193 382 ntBASIC13.33□□□□□ -0.28
Hoxc6P10629 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxc6P10629 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxc6P10629 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hoxc6P10629 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Hoxc6P10629 Gm4034-201ENSMUST00000187674 480 ntBASIC13.33□□□□□ -0.28
Hoxc6P10629 Gm8531-201ENSMUST00000188319 893 ntBASIC13.33□□□□□ -0.28
Hoxc6P10629 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.33□□□□□ -0.28
Hoxc6P10629 Gm5298-201ENSMUST00000201122 892 ntBASIC13.33□□□□□ -0.28
Hoxc6P10629 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hoxc6P10629 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.33□□□□□ -0.28
Hoxc6P10629 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.33□□□□□ -0.28
Hoxc6P10629 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc6P10629 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms