Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snx1Q9WV80 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.52□□□□□ -0.4
Snx1Q9WV80 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.52□□□□□ -0.41
Snx1Q9WV80 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Gm13492-201ENSMUST00000119772 665 ntBASIC12.52□□□□□ -0.41
Snx1Q9WV80 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Snx1Q9WV80 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Snx1Q9WV80 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.52□□□□□ -0.41
Snx1Q9WV80 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.52□□□□□ -0.41
Snx1Q9WV80 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snx1Q9WV80 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.51□□□□□ -0.41
Snx1Q9WV80 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.51□□□□□ -0.41
Snx1Q9WV80 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gm27847-201ENSMUST00000183711 107 ntBASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gm27375-201ENSMUST00000183799 107 ntBASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gm27486-201ENSMUST00000184923 80 ntBASIC12.51□□□□□ -0.41
Snx1Q9WV80 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gm22058-201ENSMUST00000083393 310 ntBASIC12.51□□□□□ -0.41
Snx1Q9WV80 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.51□□□□□ -0.41
Snx1Q9WV80 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.51□□□□□ -0.41
Snx1Q9WV80 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snx1Q9WV80 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx1Q9WV80 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx1Q9WV80 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx1Q9WV80 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.5□□□□□ -0.41
Snx1Q9WV80 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx1Q9WV80 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx1Q9WV80 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms