Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Gm23270-201ENSMUST00000104055 131 ntBASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Gm12058-201ENSMUST00000118614 437 ntBASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tubb3Q9ERD7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm2383-201ENSMUST00000181461 807 ntBASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm4034-201ENSMUST00000187674 480 ntBASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm37201-201ENSMUST00000191845 523 ntBASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12□□□□□ -0.49
Tubb3Q9ERD7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Gm10782-202ENSMUST00000223775 1480 ntBASIC12□□□□□ -0.49
Tubb3Q9ERD7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12□□□□□ -0.49
Tubb3Q9ERD7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms