Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm9230-201ENSMUST00000188228 532 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm4857-201ENSMUST00000192718 785 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm9257-201ENSMUST00000221254 232 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Rprl1-201ENSMUST00000158050 327 ntBASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm26361-201ENSMUST00000158868 186 ntBASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Rprl1-202ENSMUST00000198476 238 ntBASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm45598-202ENSMUST00000210719 986 ntBASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm19994-201ENSMUST00000217086 586 ntBASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.6□□□□□ -0.39
Chmp2aQ9DB34 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Gm14644-201ENSMUST00000116671 647 ntBASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Gm13296-201ENSMUST00000117854 997 ntBASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Gm7722-201ENSMUST00000120646 741 ntBASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Chmp2aQ9DB34 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms