Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Gm11660-201ENSMUST00000120955 412 ntBASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Stag1Q9D3E6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Stag1Q9D3E6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Gm15004-201ENSMUST00000119192 630 ntBASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Gm8285-201ENSMUST00000208293 759 ntBASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.39□□□□□ -0.11
Stag1Q9D3E6 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Stag1Q9D3E6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Gm11667-201ENSMUST00000119828 486 ntBASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Gm12029-201ENSMUST00000120073 832 ntBASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Gm14665-201ENSMUST00000122294 557 ntBASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Gm44551-201ENSMUST00000208804 171 ntBASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Gm45575-201ENSMUST00000210283 548 ntBASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stag1Q9D3E6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.37□□□□□ -0.11
Stag1Q9D3E6 Gm15881-201ENSMUST00000148792 942 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms