Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Gm6108-201ENSMUST00000208365 367 ntBASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Gm5451-201ENSMUST00000080545 579 ntBASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm23272-201ENSMUST00000104053 129 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm15610-201ENSMUST00000120584 195 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm38151-201ENSMUST00000195085 289 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm44882-201ENSMUST00000205702 802 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm18460-201ENSMUST00000208088 464 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cldnd1Q9CQX5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Gm13117-201ENSMUST00000120894 691 ntBASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Gm11354-201ENSMUST00000121974 422 ntBASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Gm3726-201ENSMUST00000203110 785 ntBASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Gm45500-201ENSMUST00000211676 803 ntBASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.31□□□□□ -0.44
Cldnd1Q9CQX5 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms