Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gm4034-201ENSMUST00000187674 480 ntBASIC11.44□□□□□ -0.58
Ska1Q9CPV1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ska1Q9CPV1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ska1Q9CPV1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gm11424-201ENSMUST00000121929 829 ntBASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gm27682-201ENSMUST00000183930 110 ntBASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.42□□□□□ -0.58
Ska1Q9CPV1 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska1Q9CPV1 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms