Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Gm26013-201ENSMUST00000104404 119 ntBASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Gm10731-201ENSMUST00000181171 448 ntBASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx6-1Q99MA9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Gm4654-201ENSMUST00000183305 982 ntBASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Gm8956-201ENSMUST00000203939 825 ntBASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx6-1Q99MA9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.36□□□□□ -0.59
Nkx6-1Q99MA9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms