Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gm11663-201ENSMUST00000117888 290 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gm13611-201ENSMUST00000118269 318 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.95□□□□□ -0.34
TraipQ8VIG6 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gm5523-201ENSMUST00000180415 997 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gm9797-202ENSMUST00000218003 294 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.95□□□□□ -0.34
TraipQ8VIG6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TraipQ8VIG6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12616-201ENSMUST00000118594 382 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12624-201ENSMUST00000177615 382 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12621-201ENSMUST00000177760 382 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12615-201ENSMUST00000177970 382 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12622-201ENSMUST00000177975 382 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12627-201ENSMUST00000178412 382 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12625-201ENSMUST00000179122 382 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12614-201ENSMUST00000179586 382 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm12613-201ENSMUST00000180323 382 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 AC122305.2-201ENSMUST00000215148 834 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm2553-201ENSMUST00000215986 605 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm10288-201ENSMUST00000084614 537 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm37234-201ENSMUST00000193259 1441 ntBASIC12.94□□□□□ -0.34
TraipQ8VIG6 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TraipQ8VIG6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.93□□□□□ -0.34
TraipQ8VIG6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms