Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Gm12419-201ENSMUST00000116649 636 ntBASIC13.62□□□□□ -0.23
Syne4Q8CII8 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.62□□□□□ -0.23
Syne4Q8CII8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.62□□□□□ -0.23
Syne4Q8CII8 Gm8342-201ENSMUST00000209839 757 ntBASIC13.62□□□□□ -0.23
Syne4Q8CII8 Gm9111-201ENSMUST00000219394 709 ntBASIC13.62□□□□□ -0.23
Syne4Q8CII8 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.62□□□□□ -0.23
Syne4Q8CII8 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Syne4Q8CII8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.61□□□□□ -0.23
Syne4Q8CII8 Mir6407-201ENSMUST00000184510 101 ntBASIC13.61□□□□□ -0.23
Syne4Q8CII8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.61□□□□□ -0.23
Syne4Q8CII8 Gm18059-201ENSMUST00000208073 580 ntBASIC13.61□□□□□ -0.23
Syne4Q8CII8 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.61□□□□□ -0.23
Syne4Q8CII8 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.61□□□□□ -0.23
Syne4Q8CII8 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.61□□□□□ -0.23
Syne4Q8CII8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Syne4Q8CII8 Matn2-206ENSMUST00000228570 2798 ntBASIC13.6□□□□□ -0.23
Syne4Q8CII8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syne4Q8CII8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Syne4Q8CII8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Syne4Q8CII8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.6□□□□□ -0.23
Syne4Q8CII8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syne4Q8CII8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syne4Q8CII8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syne4Q8CII8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Syne4Q8CII8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Syne4Q8CII8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms