Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gm14247-201ENSMUST00000120950 237 ntBASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gm9794-201ENSMUST00000202370 423 ntBASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Gm12502-201ENSMUST00000120197 444 ntBASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lysmd4Q8CC84 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Gm24934-201ENSMUST00000103764 111 ntBASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Gm11439-201ENSMUST00000118598 409 ntBASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.79□□□□□ -0.68
Lysmd4Q8CC84 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms