Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gm38317-201ENSMUST00000195564 343 ntBASIC12.37□□□□□ -0.43
Sfr1Q8BP27 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sfr1Q8BP27 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm23912-201ENSMUST00000104687 87 ntBASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm14644-201ENSMUST00000116671 647 ntBASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm6963-201ENSMUST00000147879 379 ntBASIC12.36□□□□□ -0.43
Sfr1Q8BP27 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm5070-201ENSMUST00000177599 862 ntBASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm25890-201ENSMUST00000177643 165 ntBASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm22614-201ENSMUST00000178300 165 ntBASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm9230-201ENSMUST00000188228 532 ntBASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.36□□□□□ -0.43
Sfr1Q8BP27 Gm44651-201ENSMUST00000207343 372 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms