Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Cog3-203ENSMUST00000227473 4197 ntBASIC12.87□□□□□ -0.35
Scube3Q66PY1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.87□□□□□ -0.35
Scube3Q66PY1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scube3Q66PY1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scube3Q66PY1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scube3Q66PY1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scube3Q66PY1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scube3Q66PY1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scube3Q66PY1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scube3Q66PY1 AC163296.2-201ENSMUST00000220177 1315 ntBASIC12.87□□□□□ -0.35
Scube3Q66PY1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 AC140393.3-201ENSMUST00000228396 1352 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gm26361-201ENSMUST00000158868 186 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gm37576-201ENSMUST00000194228 372 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gm45224-201ENSMUST00000208203 414 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 AC118006.2-201ENSMUST00000224167 962 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.86□□□□□ -0.35
Scube3Q66PY1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scube3Q66PY1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.85□□□□□ -0.35
Scube3Q66PY1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm13665-201ENSMUST00000120830 528 ntBASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm32999-201ENSMUST00000192693 562 ntBASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm43058-201ENSMUST00000197645 625 ntBASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm19187-201ENSMUST00000206781 892 ntBASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm45598-202ENSMUST00000210719 986 ntBASIC12.85□□□□□ -0.35
Scube3Q66PY1 AC158388.1-201ENSMUST00000225441 256 ntBASIC12.85□□□□□ -0.35
Scube3Q66PY1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scube3Q66PY1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms